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VBRC Gene Detail
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[VBRC|VP0048290] DENV-2-16681_Kin-NS5 location: (7570..10269) VOC[938]: NS5 VOC function: RNA-dependent RNA polymerase GenBank gene acc: NP_739590 GenBank locus name: mp_NS5 [VBRC|VP0048289] DENV-2-16681_Kin-NS4b location: (6826..7569) VOC[937]: NS4b VOC function: Nonstructural protein NS4b GenBank gene acc: NP_739589 GenBank locus name: mp_NS4B [VBRC|VP0048288] DENV-2-16681_Kin-2K location: (6757..6825) VOC[941]: 2K VOC function: 2K protein GenBank gene acc: NP_739593 GenBank locus name: mp_2K [VBRC|VP0048287] DENV-2-16681_Kin-NS4a location: (6376..6756) VOC[936]: NS4a VOC function: Nonstructural protein NS4a GenBank gene acc: NP_739588 GenBank locus name: mp_NS4A [VBRC|VP0048286] DENV-2-16681_Kin-NS3 location: (4522..6375) VOC[935]: NS3 VOC function: Nonstructural protein NS3 (protease/helicase) GenBank gene acc: NP_739587 GenBank locus name: mp_NS3 [VBRC|VP0048285] DENV-2-16681_Kin-NS2b location: (4132..4521) VOC[934]: NS2b VOC function: Nonstructural protein NS2b GenBank gene acc: NP_739586 GenBank locus name: mp_NS2B [VBRC|VP0048284] DENV-2-16681_Kin-NS2a location: (3478..4131) VOC[933]: NS2a VOC function: Nonstructural protein NS2a GenBank gene acc: NP_739585 GenBank locus name: mp_NS2A [VBRC|VP0048283] DENV-2-16681_Kin-NS1 location: (2422..3477) VOC[932]: NS1 VOC function: Nonstructural protein NS1 GenBank gene acc: NP_739584 GenBank locus name: mp_NS1 [VBRC|VP0048282] DENV-2-16681_Kin-E location: (937..2421) VOC[931]: E VOC function: Envelope protein GenBank gene acc: NP_739583 GenBank locus name: mp_E [VBRC|VP0048281] DENV-2-16681_Kin-M location: (712..936) VOC[939]: M VOC function: Membrane glycoprotein GenBank gene acc: NP_739592 GenBank locus name: mp_M [VBRC|VP0048280] DENV-2-16681_Kin-preM location: (439..936) VOC[930]: preM VOC function: Membrane glycoprotein precursor GenBank gene acc: NP_739582 GenBank locus name: mp_prM [VBRC|VP0048279] DENV-2-16681_Kin-C location: (97..396) VOC[940]: C VOC function: Nucleocapsid protein GenBank gene acc: NP_739591 GenBank locus name: mp_virC [VBRC|VP0048278] DENV-2-16681_Kin-ancC location: (97..438) VOC[929]: ancC VOC function: Anchored nucleocapsid protein GenBank gene acc: NP_739581 GenBank locus name: mp_anchC [VBRC|VP0048277] DENV-2-16681_Kin-PP location: (97..10272) VOC[928]: PP VOC function: Polyprotein GenBank gene acc: NP_056776 GenBank locus name: polyprotein
GENE VBRC accession: VP0048277 name: DENV-2-16681_Kin-PP
  (2 older abbreviations)
Protein Family (VOC) VOC ID: VBRC|VC928 name: Polyprotein
  abbr: PP function: Polyprotein
  alternate abbr: polyprotein
GenBank locus: polyprotein accession: NP_056776
Molecule type: polyprotein length: 10176 bp, 3391 aa
  molecular weight: 379,807 pI: 8.77
Annotation added: 6/4/1997 source: genbank
Annotations copied unmodified from GenBank record
Location (97..10272) in: Dengue virus type 2 strain 16681-Kinney (GenBank: NC_001474)
VBRC Taxonomy Flaviviridae>Flavivirus>Dengue virus>2
Protein Analysis   Blast Analysis   Sequence   Immune Epitopes   Curation   Notes  
Analysis Results VBRC Hits Evidence
Amino Acids Composition   IEA
Transmembrane Domains Number of domains: 13
(Select for Transmembrane Record) 		  IEA
Prosite Motifs No Hits   IEA
Coiled-coil Segments None IEA
Secretory Signal Peptides Got One!   IEA
InterPro Hits
1.Flaviviral glycoprotein E, central domain, region 2
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 IEA
Gene Ontology ID
1.GO:0016021 : integral to membrane
2.GO:0019031 : viral envelope
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 IEA
PDB Hits
1.A mol:protein length:305 RNA-DIRECTED RNA POLYMERASE
2.B mol:protein length:394 ENVELOPE GLYCOPROTEIN
3.A mol:protein length:394 MAJOR ENVELOPE PROTEIN E
4.B mol:protein length:394 MAJOR ENVELOPE PROTEIN E
5.C mol:protein length:495 Major envelope protein E
6.A mol:protein length:295 Genome polyprotein
7.B mol:protein length:100 Genome polyprotein
8.A mol:protein length:395 envelope glycoprotein
9.C mol:protein length:395 envelope glycoprotein
10.C mol:protein length:395 Major envelope protein E
11.C mol:protein length:394 envelope glycoprotein
12.B mol:protein length:451 RNA HELICASE
13.B mol:protein length:451 RNA HELICASE
14.A mol:protein length:305 type II methyltransferase
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 IEA
Protein-Protein Interaction No Hits   IEA
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